Microsoft Security Keys May Require PIN After Recent Windows Updates

By Published On: November 27, 2025

In the evolving landscape of digital security, changes to how we authenticate ourselves are common, often driven by a need for enhanced protection. Microsoft has recently introduced a significant update affecting how FIDO2 security keys operate on Windows 11. This change, which may now prompt users to set up a Personal Identification Number (PIN) during authentication, aligns closely with industry-standard WebAuthn specifications for stronger user verification.

This adjustment, while perhaps requiring a brief adaptation period for users, ultimately fortifies the security posture of systems relying on these keys. Understanding the implications and requirements of this update is crucial for IT professionals, security analysts, and developers managing Windows environments.

The Shift to PIN-Protected FIDO2 Keys

Microsoft confirmed that FIDO2 security keys on Windows 11 are transitioning towards requiring a PIN for authentication. This is not arbitrary; it’s a strategic move to bolster the security mechanisms inherent in FIDO2. The FIDO Alliance, the organization behind the FIDO standards, specifies that a second factor (like a PIN or biometric) should ideally be used in conjunction with a FIDO authenticator. This multi-factor approach significantly reduces the risk of unauthorized access, even if the physical security key is compromised.

This update means that when users attempt to authenticate with their FIDO2 security key, they might now be prompted to set up a PIN if they haven’t already. This PIN acts as a local secret, protecting the key itself from being used by anyone who might physically possess it but doesn’t know the PIN.

WebAuthn Standards and Enhanced User Verification

The integration of PIN prompts with FIDO2 keys directly aligns with WebAuthn standards, specifically highlighting principles for enhanced user verification. WebAuthn, a core component of FIDO2, enables strong, phishing-resistant authentication using public-key cryptography. By requiring a PIN, Microsoft is effectively implementing a two-factor authentication (2FA) mechanism directly on the security key itself. This means:

  • Something you have: The physical FIDO2 security key.
  • Something you know: The PIN associated with that key.

This combination drastically increases the difficulty for attackers to gain access. Even if an attacker manages to obtain a user’s physical security key, without the corresponding PIN, the key remains unusable. This layered security approach is a cornerstone of modern cybersecurity best practices.

Rollout and Affected Updates

The implementation of this change commenced with specific preview updates for Windows 11. Initially, this behavior was observed following the September 29, 2025, preview update KB5065789 for OS Builds 26200.6725 and 26100.6725. Microsoft indicated that this rollout would be gradual, meaning not all users would experience the change simultaneously, but it would eventually become standard practice across affected Windows 11 systems.

Organizations and individual users should ensure their systems are kept up-to-date with the latest Windows patches to benefit from these security enhancements and to anticipate potential changes in user workflows. While specific CVEs are not directly applicable to a feature enhancement like this, the underlying security principles address broad categories of authentication vulnerabilities by strengthening the FIDO2 protocol’s implementation.

Client-Side PIN Management and Recovery

Users who encounter the prompt to set up a PIN for their FIDO2 security key will typically do so through the Windows Security settings or directly through the authentication process. It’s crucial for users to remember their PINs. Most FIDO2 keys offer various mechanisms for PIN management, including:

  • Setting a new PIN: During initial setup or when prompted.
  • Changing an existing PIN: Through Windows settings or dedicated security key management tools.
  • PIN reset: Some keys allow for a factory reset which often erases all stored credentials and the PIN, effectively making it a new key. This is a last resort if the PIN is forgotten and could lead to loss of access if not managed carefully.

Administrators should consider providing clear instructions and support for their users regarding PIN management for FIDO2 keys to mitigate potential help desk calls related to forgotten PINs or initial setup challenges.

Implications for IT Professionals and Developers

For IT professionals and developers, this update necessitates a review of existing authentication policies and user training materials. Key considerations include:

  • User Education: Inform users about the new PIN requirement, its importance, and how to set/manage it.
  • Help Desk Preparedness: Train support staff on common issues related to FIDO2 PINs, including forgotten PINs and key resets.
  • Policy Alignment: Ensure that organizational security policies reflect the strengthened FIDO2 authentication requirements.
  • Application Compatibility: While FIDO2 keys are standard, any custom applications relying on specific authentication flows might need testing to ensure smooth integration with the new PIN prompt.

This move by Microsoft reinforces the industry-wide push for stronger, phishing-resistant authentication methods, making FIDO2 keys an even more robust choice for securing access to digital assets.

Summary

Microsoft’s recent updates to Windows 11 are bringing FIDO2 security keys into closer alignment with WebAuthn standards by potentially requiring a PIN for authentication. This change, rolling out gradually, significantly enhances user verification by adding a “something you know” factor to the “something you have” of the security key. While it introduces a new step for users, the added layer of security makes it much harder for unauthorized individuals to compromise accounts, even if they gain physical possession of a security key. Organizations should prepare by updating user guidance and ensuring their support teams are ready to assist with PIN management.

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